HOT!shRNA克隆3保1!
GeneCopoeia提供病毒和非病毒载体的人、小鼠和大鼠全基因组OmicsLink™ shRNA表达克隆,shRNA序列经专利算法设计包括茎(19-29对核苷酸)和环,确保高效的抑制作用和最低的脱靶效应。
shRNA抑制效率保证
对于构建到慢病毒和哺乳动物载体的shRNA克隆,我们针对每个基因提供3个克隆,在靶细胞的转染效率达到85%以上的情况下,保证至少有1个克隆通过qRT-PCR检测对靶基因的表达抑制水平达到70%以上。
靶向任意细胞
使用慢病毒和非病毒载体系统,既可以转染或转导shRNA进入常规的分裂细胞,也可以进入难转染的非分裂细胞,如原代细胞、神经元细胞等。
灵活的载体选择
每个shRNA克隆提供5 µg纯化质粒,也提供客户定制的慢病毒载体的shRNA克隆。定制该克隆,请填写表格。
标签及报告基因
载体中带有的mCherry和eGFP报告基因可以用于监测转染和转导效率,嘌呤霉素标记可用于稳定细胞系的筛选。
全长测序的表达框架
载体的插入序列已经过测序,包括启动子、编码shRNA的正义和反义链、发夹结构、终止子和其他接头序列。
图1. shRNA克隆的病毒和非病毒表达载体
产品应用
基因表达下调 — 以包含无义序列的克隆为对照,研究shRNA克隆对单个基因表达的下调效果。在每个shRNA克隆订单中赠送对照克隆。
信号通路研究 — 我们将克隆按照不同的信号传导、代谢、疾病通路、基因家族等进行了分类,并将已知同一通路的shRNA表达克隆以96孔或384孔板的形式排列在一起,可一次研究一组基因在某一信号通路中的功能。目前我们提供针对人类全部激酶基因的shRNA表达克隆,并已按照按不同激酶的功能进行了分类。
靶点及功能验证 — OmicsLink™ ORF表达克隆和在shRNA靶序列带有沉默突变的ORF表达克隆一起使用可用于shRNA靶点验证和基因功能拯救研究。
图2. shRNA抑制基因表达的机制
shRNA表达克隆对基因表达抑制效应的检测方法 |
qRT-PCR — shRNA克隆的表达能导致靶标基因所转录的mRNA被切割和降解,从而降低蛋白的表达量。所以推荐检测表达抑制效率的第一步是qRT-PCR。GeneCopeia提供验证过的对应靶标基因和其他已报导的转录本的qRT-PCR引物。
Western Blot检测 — 大部分情况下,检测shRNA对基因表达的抑制效率需要用Western Blot方法来检测蛋白表达水平。
功能检测 — 检测表达抑制效率还可用生物和生化的终点分析方法,如细胞增殖、克隆形成、细胞周期、细胞迁移等。
报告基因检测表达水平 — 当研究的靶标基因内源转录水平很低,且不适宜使用qRT-PCR和WB检测时,表达抑制效率的检测也可通过共转导shRNA克隆和一个含靶标基因并带了报告基因的表达克隆,检测报告基因的表达水平即可。靶基因的mRNA遭shRNA的破坏,同时导致了报告基因的mRNA遭破坏,从而表现为报告蛋白的表达量下降。因而表达抑制效率可以用报告蛋白的酶活性分析结果来进行量化。
图3. shRNA(psi-sH1载体)对人激酶家族成员表达抑制效率的验证。psiCheck-AP载体以CMV为启动子,包括靶标激酶的ORF区和用于比色实验的碱性磷酸酶(AP)基因。A. 通过比色实验量化AP在没有shRNA的情况下的表达。B. 共转染shRNA和AP ORF表达克隆后,AP ORF的转录本被降解,AP基因翻译受阻导致荧光消失。
OmicsLink shRNA表达克隆载体
载体 | 启动子 | 筛选标记 | 报告基因 | 病毒类型 |
psi-H1 | H1 | Puromycin | eGFP | N/A |
psi-U6 | U6 | Puromycin | eGFP | N/A |
psi-mH1 | H1 | Puromycin | mCherry | N/A |
psi-mU6 | U6 | Puromycin | mCherry | N/A |
psi-nH1 | H1 | Puromycin | N/A | N/A |
psi-nU6 | U6 | Puromycin | N/A | N/A |
psi-LVRH1GP | H1 | Puromycin | eGFP | HIV |
psi-LVRU6GP | U6 | Puromycin | eGFP | HIV |
psi-LVRH1MP | H1 | Puromycin | mCherry | HIV |
psi-LVRU6MP | U6 | Puromycin | mCherry | HIV |
psi-LVRH1P | H1 | Puromycin | N/A | HIV |
psi-LVRU6P | U6 | Puromycin | N/A | HIV |
psi-LVRU6GH | U6 | Hygromycin | EGFP | HIV |
psi-LVRH1GH | H1 | Hygromycin | EGFP | HIV |
psi-LVRU6MH | U6 | Hygromycin | mcherry | HIV |
psi-LVRH1MH | H1 | Hygromycin | mcherry | HIV |
psi-LVRU6H | U6 | Hygromycin | N/A | HIV |
psi-LVRH1H | H1 | Hygromycin | N/A | HIV |
psi-LVE001 | CMV | Puromycin | EGFP | HIV |
psi-LVE002 | CMV | Puromycin | mcherry | HIV |
psi-LVE003 | EF1a | Puromycin | EGFP | HIV |
psi-LVE004 | EF1a | Puromycin | mcherry | HIV |
shRNA表达克隆客户定制服务
预制的shRNA克隆套装
GeneCopeia提供载体可选的超过24,000条人、20,000条小鼠和10,000条大鼠预制的shRNA克隆套装。
慢病毒载体的shRNA表达克隆
GeneCopoeia 提供定制慢病毒载体的shRNA表达克隆的服务, 浏览价格信息,请填写表格。
shRNA表达克隆定制服务
相关产品
- Yang, Q., et al. (2023). N4‐Acetylcytidine Drives Glycolysis Addiction in Gastric Cancer via NAT10/SEPT9/HIF‐1α Positive Feedback Loop. Advanced Science doi: 10.1002/advs.202300898 [Lenti-Pac™ HIV Expression Packaging Kit; OMICSLINK™ lentiviral shRNA clone; miTarget™ 3′ UTR Clone; Luc-Pair™ Duo-Luciferase HS Assay Kit]
- Fan, Q., et al. (2023). Hyper α2,6‐Sialylation Promotes CD4+ T‐Cell Activation and Induces the Occurrence of Ulcerative Colitis. Advanced Science doi: 10.1002/advs.202302607 [OMICSLINK™ shRNA clone]
- Hao, X., et al. (2023). BI-907828, a novel potent MDM2 inhibitor, inhibits glioblastoma brain tumor stem cells in vitro and prolongs survival in orthotopic xenograft mouse models. Neuro-Oncology doi: 10.1093/neuonc/noac271 [OMICSLINK™ shRNA clones]
- Li, F., et al. (2023). RIPK1-dependent necroptosis promotes vasculogenic mimicry formation via eIF4E in triple-negative breast cancer. Cell Death Dis doi: 10.1038/s41419-023-05841-w [Lenti-Pac™ HIV Expression Packaging Kit; OMICSLINK™ RIPK1, EIF4E ORF expression clone; OMICSLINK™ RIPK1 shRNA expression clones]
- Zhou, L., et al. (2023). Syntaxin-6 promotes the progression of hepatocellular carcinoma and alters its sensitivity to chemotherapies by activating the USF2/LC3B axis. Int J Biol Sci doi: 10.7150/ijbs.86636 [OMICSLINK™ STX6 ORF expression clone; OMICSLINK™ STX6 shRNA clone]
- Yan, B., et al. (2023). The YTHDC1/GLUT3/RNF183 axis forms a positive feedback loop that modulates glucose metabolism and bladder cancer progression. Exp Mol Med doi: 10.1038/s12276-023-00997-z [OMICSLINK™ YTHDC1, GLUT3, RNF183 ORF expression clone; OMICSLINK™ YTHDC1,RNF183 shRNA clone set]
- Liu, X., et al. (2023). Loss of function of GATA3 regulates FRA1 and c-FOS to activate EMT and promote mammary tumorigenesis and metastasis. Cell Death Dis doi: 10.1038/s41419-023-05888-9 [OMICSLINK™ Gata3 shRNA expression clones; OMICSLINK™ FOS ORF expression clone]
- Wu, T., et al. (2023). miR-30e-5p-mediated FOXD1 promotes cell proliferation by blocking cellular senescence and apoptosis through p21/CDK2/Rb signaling in head and neck carcinoma. Cell Death Discov doi: 10.1038/s41420-023-01571-2 [OMICSLINK™ shRNA clones targeting FOXD1 and control]
- Santos, F.F., et al. (2023). HIV-1-induced nuclear invaginations mediated by VAP-A; ORP3; and Rab7 complex explain infection of activated T cells. Nat Commun doi: 10.1038/s41467-023-40227-8 [OMICSLINK™ shRNA clones targeting VAP-A, VAP-B, ORP3 and control]
- Pilgrim, A.A., et al. (2023). The yes-associated protein (YAP) is associated with resistance to anti-GD2 immunotherapy in neuroblastoma through downregulation of ST8SIA1. Oncoimmunology doi: 10.1080/2162402X.2023.2240678 [OMICSLINK™ ST8SIA1 shRNA targeting clones]
- Ma, W., et al. (2023). Dermokine mutations contribute to epithelial-mesenchymal transition and advanced melanoma through ERK/MAPK pathways. PLoS One doi: 10.1371/journal.pone.0285806 [OMICSLINK™ DMKN shRNA targeting clones]
- García-Hernández, B., et al. (2023). Txnip expression promotes JNK-mediated neuronal death in response to reactive oxygen species. Front Mol Neurosci doi: 10.3389/fnmol.2023.1210962 [OMICSLINK™ Txnip shRNA clone]
- Li, L., et al. (2023). FSCN1 promotes proliferation; invasion and glycolysis via the IRF4/AKT signaling pathway in oral squamous cell carcinoma. BMC Oral Health doi: 10.1186/s12903-023-03191-9 [OMICSLINK™ FSCN1 shRNA clone; Lenti-Pac™ HIV expression packaging kit]
- Li, C., et al. (2023). Cutaneous squamous cell carcinoma-derived extracellular vesicles exert an oncogenic role by activating cancer-associated fibroblasts. Cell Death Discov doi: 10.1038/s41420-023-01555-2 [OMICSLINK™ RAB27A shRNA clone]
- Cao, W., et al. (2023). Knockdown of FUT11 inhibits the progression of gastric cancer via the PI3K/AKT pathway. Heliyon doi: 10.1016/j.heliyon.2023.e17600 [OMICSLINK™ FUT11 shRNA clone; OMICSLINK™ COL6A3 ORF expression clone]
- Yap, C.C., et al. (2023). Disruption of Golgi markers by two RILP-directed shRNAs in neurons: A new role for RILP or a neuron-specific off-target phenotype? J Biol Chem doi: 10.1016/j.jbc.2023.104916 [OMICSLINK™ RILP shRNA clone set]
- Guo, M., et al. (2023). Identification of the prognostic biomarkers and their correlations with immune infiltration in colorectal cancer through bioinformatics analysis and in vitro experiments. Heliyon doi: 10.1016/j.heliyon.2023.e17101 [OMICSLINK™ AR, EPPK1 and JUP shRNA clone set]
- Yang, L., et al. (2023). Androgen dihydrotestosterone promotes bladder cancer cell proliferation and invasion via EPPK1-mediated MAPK/JUP signalling. Cell Death Dis doi: 10.1038/s41419-023-05882-1 [OMICSLINK™ AR, EPPK1 and JUP shRNA clone set]
- Wu, X., et al. (2023). Regulating the cell shift of endothelial cell-like myofibroblasts in pulmonary fibrosis. Eur Respir J doi: 10.1183/13993003.01799-2022 [OMICSLINK™ FoxA2 Lentiviral ORF expression clone; OMICSLINK™ siRNA FoxA2]
- Zhou, Q., et al. (2023). HNF4A-BAP31-VDAC1 axis synchronously regulates cell proliferation and ferroptosis in gastric cancer. Cell Death Dis doi: 10.1038/s41419-023-05868-z [OMICSLINK™ NRF2 shRNA expression clone]
- Lin, M., et al. (2023). TRIM55 inhibits colorectal cancer development via enhancing protein degradation of c‐Myc. Cancer Med doi: 10.1002/cam4.6020 [OMICSLINK™ siRNA]
- Wei, Y., et al. (2023). LncRNA XIST promotes adjuvant-induced arthritis by increasing the expression of YY1 via miR-34a-5p. Arch Rheumatol doi: 10.46497/ArchRheumatol.2022.9250 [miExpress™ inhibitor clone; OMICSLINK™ lentiviral shRNA clone; OMICSLINK™ ORF expression clones; Lenti-Pac™ HIV Expression Packaging Kit]
- Zhu,Y., et al. (2023). Research on Radiosensitivity of the Protein Kinase B Signaling Pathway in Cervical Cancer. Comput Math Methods Med doi: 10.1155/2021/6350038 [Lenti-Pac™ HIV Expression Packaging Kit; OMICSLINK™ shRNA clone]
- Zhang, X., et al. (2023). IGFBP3 induced by the TGF-β/EGFRvIII transactivation contributes to the malignant phenotype of glioblastoma. iScience doi: 10.1016/j.isci.2023.106639 [Lentifect™ shRNA lentiviral particles]
- Roganowicz, M., et al. (2023). BAZ2A-RNA mediated association with TOP2A and KDM1A represses genes implicated in prostate cancer. Life Sci Alliance doi: 10.26508/lsa.202301950 [OMICSLINK™ mouse BAZ2A ORF expression clone; OMICSLINK™ BAZ2A shRNA expression clone]
- Yang, Y., et al. (2023). PLCG2 can exist in eccDNA and contribute to the metastasis of non-small cell lung cancer by regulating mitochondrial respiration. Cell Death Dis doi: 10.1038/s41419-023-05755-7 [OMICSLINK™ PLCG2 ORF expression clone and its negative control; PLCG2-siRNA]
- Wang, S., et al. (2023). miRNA-27a is essential for bone remodeling by modulating p62-mediated osteoclast signaling. eLife doi: 10.7554/eLife.79768 [miExpress™ miRNA precursor clone; OMICSLINK™ Sqstm1 shRNA expression clones]
- Liu, P., et al. (2023). FUT2 promotes the tumorigenicity and metastasis of colorectal cancer cells via the Wnt/β-catenin pathway. Int J Oncol doi: 10.3892/ijo.2023.5483 [vectors (pGPU6/GFP/Neo-FUT2 or pGPU6/GFP/Neo-shNC)]
- Seong, C-S., et al. (2023). Loss of the endocytic tumor suppressor HD-PTP phenocopies LKB1 and promotes RAS-driven oncogenesis. bioRxiv doi: 10.1101/2023.01.26.525772 [Lentifect™ shRNA lentiviral particles]
- Espadas, I., et al. (2023). SLAMR; a synaptically targeted lncRNA; facilitates the consolidation of contextual fear memory. Res Sq doi: 10.21203/rs.3.rs-2489387/v1 [OMICSLINK™ shRNA clones]
- Cordovado, A., et al. (2023). SEMA6B variants cause intellectual disability and alter dendritic spine density and axon guidance. Hum Mol Genet doi: 10.1093/hmg/ddac114 [OMICSLINK™ shRNA clones]
- Wang, X., et al. (2023). Long Noncoding RNAs Hepatocyte Nuclear Factor 4A Antisense RNA 1 and Hepatocyte Nuclear Factor 1A Antisense RNA 1 Are Involved in Ritonavir-Induced Cytotoxicity in Hepatoma Cells. Drug Metab Dispos doi: 10.1124/dmd.121.000693 [OMICSLINK™ shRNA clone; OMICSLINK™ ORF expression clone]
- Zhou, M., et al. (2023). Adiponectin protects skeletal muscle from ischaemia–reperfusion injury in mice through miR‐21/PI3K/Akt signalling pathway. Int Wound J doi: 10.1111/iwj.14022 [OMICSLINK™ shRNA clones]
- Cao, F., et al. (2023). Celastrol Treatment Ameliorated Acute Ischemic Stroke-Induced Brain Injury by Microglial Injury Inhibition and Nrf2/HO-1 Pathway Activations. Biomed Res Int doi: 10.1155/2023/1076522 [OMICSLINK™ lentiviral shRNA clone set against Nrf2]
- Wang, Q., et al. (2023). HnRNPAB is an independent prognostic factor in non‑small cell lung cancer and is involved in cell proliferation and metastasis. Oncol Lett doi: 10.3892/ol.2023.13801 [psi-LVRU6GP vector]
- Khanal, P., et al. (2023). Gas7 Is a Novel Dendritic Spine Initiation Factor. eNeuro doi: 10.1523/ENEURO.0344-22.2023 [OMICSLINK™ Gas7 shRNA expression clones; shRNA scrambled control clone for psi-H1]
- Li, T., et al. (2023). Nanoparticle-mediated TRPV1 channel blockade amplifies cancer thermo-immunotherapy via heat shock factor 1 modulation. Nat Commun doi: 10.1038/s41467-023-38128-x [OMICSLINK™ TRPV1 shRNA expression clone]
- Chen, J., et al. (2023). Increased FOXM1 Expression was Associated with the Prognosis and the Recruitment of Neutrophils in Endometrial Cancer. J Immunol Res doi: 10.1155/2023/5437526 [OMICSLINK™ lentiviral FOXM1 shRNA expression clone set]
- Li, J., et al. (2023). Knockdown of NCAPG promotes the apoptosis and inhibits the invasion and migration of triple‑negative breast cancer MDA‑MB‑231 cells via regulation of EGFR/JAK/STAT3 signaling. Exp Ther Med doi: 10.3892/etm.2023.11818 [OmicsLink™ NCAPG shRNA expression clones]
- Bodnar-Wachtel, M., et al. (2023). Inflammasome-independent NLRP3 function enforces ATM activity in response to genotoxic stress. Life Sci Alliance doi: 10.26508/lsa.202201494 [OMICSLINK™ shRNA clones targeting NLRP3]
- Nguyen, T.T.M., et al. (2023). GPX8 regulates clear cell renal cell carcinoma tumorigenesis through promoting lipogenesis by NNMT. J Exp Clin Cancer Res doi: 10.1186/s13046-023-02607-2 [OMICSLINK™ NNMT shRNA expression clones]
- Huang, X., et al. (2023). Downregulation of LncRNA GCLC-1 Promotes Microcystin-LR-Induced Malignant Transformation of Human Liver Cells by Regulating GCLC Expression. Toxics doi: 10.3390/toxics11020162 [OMICSLINK™ shRNA clones targeting LOC101927136; Lenti-Pac™ HIV Expression Packaging Kit]
- Lin, Y., et al. (2023). The FGFR1 Signaling Pathway Upregulates the Oncogenic Transcription Factor FOXQ1 to Promote Breast Cancer Cell Growth. Int J Biol Sci doi: 10.7150/ijbs.74574 [OMICSLINK™ FOXQ1 shRNA expression clones]
- Soni, S., et al. (2023). MAPKAPK2-centric transcriptome profiling reveals its major role in governing molecular crosstalk of IGFBP2; MUC4; and PRKAR2B during HNSCC pathogenesis. Comput Struct Biotechnol J doi: 10.1016/j.csbj.2023.01.039 [scrambled control vector CSHCTR001-CU6]
- Lazo, O.M., et al. (2023). Rab10 regulates the sorting of internalised TrkB for retrograde axonal transport. eLife doi: 10.7554/eLife.81532 [OMICSLINK™ Rab10 shRNA expression clones]
- Liu, Y., et al. Porphyromonas gingivalis promotes malignancy and chemo-resistance via GSK3β-mediated mitochondrial oxidative phosphorylation in human esophageal squamous cell carcinoma. Transl Oncol doi: 10.1016/j.tranon.2023.101656 [OMICSLINK™ shRNA clones; empty vector control plasmid; EndoFectin™ Lenti]
- Zhu, S., et al. HOXB3 drives WNT-activation associated progression in castration-resistant prostate cancer. Cell Death Dis doi: 10.1038/s41419-023-05742-y [OMICSLINK™ shRNA clones targeting HOXB3 and APC]